Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm18041-201ENSMUST00000218210 618 ntBASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm19220-201ENSMUST00000222682 803 ntBASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mir874-201ENSMUST00000104769 76 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm15678-201ENSMUST00000117573 960 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm42550-201ENSMUST00000201553 960 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms