Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm13453-201ENSMUST00000118708 357 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm15957-201ENSMUST00000118893 974 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm17837-201ENSMUST00000186435 985 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm28630-201ENSMUST00000187806 498 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm44608-201ENSMUST00000206827 855 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav6n-6A0A075B6B2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Mir125a-201ENSMUST00000083545 68 ntBASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms