Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm24589-201ENSMUST00000116692 94 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm13036-201ENSMUST00000117799 748 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav8-1A0A075B641 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm27300-201ENSMUST00000184085 97 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm27335-201ENSMUST00000184758 97 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms