Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.57□□□□□ -0.08
Prpf40aQ9R1C7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Gm42550-201ENSMUST00000201553 960 ntBASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40aQ9R1C7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms