Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Gm5279-201ENSMUST00000199575 745 ntBASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Gm17795-201ENSMUST00000214505 757 ntBASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn2Q9R0A1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Gm18905-201ENSMUST00000205454 928 ntBASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn2Q9R0A1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn2Q9R0A1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Gm24420-201ENSMUST00000176676 59 ntBASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms