Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm3096-201ENSMUST00000185770 364 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm19994-201ENSMUST00000217086 586 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm14921-201ENSMUST00000118643 908 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm24845-201ENSMUST00000158034 109 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm44100-201ENSMUST00000204329 436 ntBASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn11aQ9R053 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn11aQ9R053 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Gm8194-201ENSMUST00000159783 859 ntBASIC15.4■□□□□ 0.06
Scn11aQ9R053 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn11aQ9R053 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Scn11aQ9R053 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Scn11aQ9R053 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Scn11aQ9R053 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm26956-201ENSMUST00000182176 986 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm8285-201ENSMUST00000208293 759 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm44551-201ENSMUST00000208804 171 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Scn11aQ9R053 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.39■□□□□ 0.05
Scn11aQ9R053 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn11aQ9R053 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms