Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Mir1982-201ENSMUST00000157368 74 ntBASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Gm18062-201ENSMUST00000208020 547 ntBASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Gm18055-201ENSMUST00000208254 547 ntBASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf3Q9QXK7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf3Q9QXK7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Gm14660-201ENSMUST00000119809 575 ntBASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf3Q9QXK7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Gm45784-201ENSMUST00000188360 142 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Gm43818-201ENSMUST00000200605 466 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf3Q9QXK7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Mir874-201ENSMUST00000104769 76 ntBASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Gm8805-201ENSMUST00000117848 313 ntBASIC14.18□□□□□ -0.14
Cpsf3Q9QXK7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms