Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prg4Q9JM99 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.05□□□□□ -0.48
Prg4Q9JM99 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prg4Q9JM99 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prg4Q9JM99 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prg4Q9JM99 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Gm37424-201ENSMUST00000191727 561 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Gm37042-201ENSMUST00000193816 581 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Snora73a-201ENSMUST00000082453 205 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.04□□□□□ -0.48
Prg4Q9JM99 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prg4Q9JM99 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm12742-201ENSMUST00000117326 410 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm8805-201ENSMUST00000117848 313 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm5370-201ENSMUST00000187187 574 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.03□□□□□ -0.48
Prg4Q9JM99 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prg4Q9JM99 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
Prg4Q9JM99 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms