Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco4Q9JIS3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Gm25016-201ENSMUST00000158399 131 ntBASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms