Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim39Q9ESN2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Gm10766-202ENSMUST00000194123 606 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Gm5425-201ENSMUST00000214125 459 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Gm18515-201ENSMUST00000219755 797 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim39Q9ESN2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms