Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm44126-201ENSMUST00000204831 514 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm27552-201ENSMUST00000183351 62 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm27844-201ENSMUST00000183613 62 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8913-201ENSMUST00000209491 641 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Gm22058-201ENSMUST00000083393 310 ntBASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-4Q9EQM3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Spcs1-203ENSMUST00000226374 592 ntBASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-4Q9EQM3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms