Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Mir125a-201ENSMUST00000083545 68 ntBASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssr3Q9DCF9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Mir7221-201ENSMUST00000184009 72 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Gm45453-201ENSMUST00000211758 853 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssr3Q9DCF9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Ank2-226ENSMUST00000189368 339 ntBASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssr3Q9DCF9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms