Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm9908-201ENSMUST00000211534 448 ntBASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf6Q9DBU5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Gm14350-201ENSMUST00000116642 640 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Gm6745-201ENSMUST00000199216 526 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf6Q9DBU5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm16202-201ENSMUST00000117532 544 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.17□□□□□ -0.14
Rnf6Q9DBU5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Gm13612-201ENSMUST00000119276 390 ntBASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Gm11978-201ENSMUST00000122315 466 ntBASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf6Q9DBU5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms