Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Gm12390-201ENSMUST00000117897 397 ntBASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Gm44069-201ENSMUST00000204898 506 ntBASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ssmem1Q9D9Y8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm11618-201ENSMUST00000117946 267 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm22331-201ENSMUST00000158066 136 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm8810-201ENSMUST00000172895 754 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ssmem1Q9D9Y8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms