Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Mir5126-201ENSMUST00000175513 77 ntBASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm20553-201ENSMUST00000204205 844 ntBASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3a3Q9D554 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gm6443-201ENSMUST00000203599 874 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3a3Q9D554 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm13884-201ENSMUST00000118103 829 ntBASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm6222-201ENSMUST00000120787 396 ntBASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3a3Q9D554 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms