Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc130Q9D516 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc130Q9D516 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc130Q9D516 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Gm9522-201ENSMUST00000182394 926 ntBASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Gm5425-201ENSMUST00000214125 459 ntBASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.32□□□□□ -0.28
Ccdc130Q9D516 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc130Q9D516 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc130Q9D516 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms