Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Gm3890-201ENSMUST00000182416 207 ntBASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Gm38241-201ENSMUST00000192641 898 ntBASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Stag1Q9D3E6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Gm15370-201ENSMUST00000117158 253 ntBASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Stag1Q9D3E6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.71■□□□□ 0.1
Stag1Q9D3E6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Stag1Q9D3E6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Stag1Q9D3E6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Stag1Q9D3E6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm13297-201ENSMUST00000120205 934 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm37042-201ENSMUST00000193816 581 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm6458-201ENSMUST00000211573 635 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stag1Q9D3E6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms