Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm25857-201ENSMUST00000082788 129 ntBASIC13.57□□□□□ -0.24
Vps28Q9D1C8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.57□□□□□ -0.24
Vps28Q9D1C8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Gm8598-201ENSMUST00000221184 836 ntBASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps28Q9D1C8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm12390-201ENSMUST00000117897 397 ntBASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm10012-201ENSMUST00000078252 192 ntBASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm6091-201ENSMUST00000098307 165 ntBASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.55□□□□□ -0.24
Vps28Q9D1C8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms