Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Gm19931-201ENSMUST00000198920 368 ntBASIC12.54□□□□□ -0.4
Upk1aQ9D132 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk1aQ9D132 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk1aQ9D132 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Gm43703-201ENSMUST00000200523 763 ntBASIC12.53□□□□□ -0.4
Upk1aQ9D132 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk1aQ9D132 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk1aQ9D132 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk1aQ9D132 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk1aQ9D132 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk1aQ9D132 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.52□□□□□ -0.4
Upk1aQ9D132 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Gm6736-201ENSMUST00000166583 948 ntBASIC12.52□□□□□ -0.41
Upk1aQ9D132 Gm43575-201ENSMUST00000196420 516 ntBASIC12.52□□□□□ -0.41
Upk1aQ9D132 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.52□□□□□ -0.41
Upk1aQ9D132 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.52□□□□□ -0.41
Upk1aQ9D132 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms