Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Gm27321-201ENSMUST00000185021 205 ntBASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Gm44124-201ENSMUST00000204159 472 ntBASIC13.12□□□□□ -0.31
Ssu72Q9CY97 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssu72Q9CY97 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.11□□□□□ -0.31
Ssu72Q9CY97 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssu72Q9CY97 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm27680-201ENSMUST00000184192 160 ntBASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm7774-201ENSMUST00000200064 533 ntBASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms