Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gm15678-201ENSMUST00000117573 960 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gm42550-201ENSMUST00000201553 960 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc3Q9CWU5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm18307-201ENSMUST00000206864 949 ntBASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc3Q9CWU5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms