Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm21854-201ENSMUST00000179901 471 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm27989-201ENSMUST00000184721 107 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm20445-201ENSMUST00000061905 565 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.56■□□□□ 0.08
Smc3Q9CW03 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.55■□□□□ 0.08
Smc3Q9CW03 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.55■□□□□ 0.08
Smc3Q9CW03 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Gm38144-201ENSMUST00000192790 465 ntBASIC15.55■□□□□ 0.08
Smc3Q9CW03 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc3Q9CW03 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.54■□□□□ 0.08
Smc3Q9CW03 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.54■□□□□ 0.08
Smc3Q9CW03 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.54■□□□□ 0.08
Smc3Q9CW03 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Smc3Q9CW03 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gm15487-201ENSMUST00000122373 465 ntBASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gm29667-201ENSMUST00000190817 490 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms