Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm10040-201ENSMUST00000080726 1662 ntBASIC14□□□□□ -0.17
Rpa3Q9CQ71 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa3Q9CQ71 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Gm6152-201ENSMUST00000151704 340 ntBASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Gm18473-201ENSMUST00000220543 868 ntBASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa3Q9CQ71 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Gm5687-201ENSMUST00000118252 640 ntBASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Gm12490-201ENSMUST00000120255 560 ntBASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms