Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska1Q9CPV1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ska1Q9CPV1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gm13453-201ENSMUST00000118708 357 ntBASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska1Q9CPV1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.51□□□□□ -0.41
Ska1Q9CPV1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
Ska1Q9CPV1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm6888-201ENSMUST00000221983 706 ntBASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms