Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.95□□□□□ -0.34
Trim16Q99PP9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim16Q99PP9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.94□□□□□ -0.34
Trim16Q99PP9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.94□□□□□ -0.34
Trim16Q99PP9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.94□□□□□ -0.34
Trim16Q99PP9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.94□□□□□ -0.34
Trim16Q99PP9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.94□□□□□ -0.34
Trim16Q99PP9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim16Q99PP9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms