Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.68□□□□□ -0.54
Rtn4rQ99PI8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm17150-201ENSMUST00000165577 381 ntBASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm27839-201ENSMUST00000184242 106 ntBASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm18187-201ENSMUST00000196476 984 ntBASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm17794-201ENSMUST00000220252 955 ntBASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rtn4rQ99PI8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rtn4rQ99PI8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms