Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm16379-201ENSMUST00000161469 348 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm8762-201ENSMUST00000193486 339 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b1Q99NB9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 AC134335.2-201ENSMUST00000227660 440 ntBASIC14□□□□□ -0.17
Sf3b1Q99NB9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gm17383-201ENSMUST00000078739 1041 ntBASIC14□□□□□ -0.17
Sf3b1Q99NB9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b1Q99NB9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms