Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.4□□□□□ -0.43
Nkx6-1Q99MA9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx6-1Q99MA9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Mir6927-201ENSMUST00000184494 71 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm43947-201ENSMUST00000203019 959 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx6-1Q99MA9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm14130-201ENSMUST00000118417 987 ntBASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms