Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.61□□□□□ -0.55
Scrt1Q99M85 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Gm37259-201ENSMUST00000193903 849 ntBASIC11.61□□□□□ -0.55
Scrt1Q99M85 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.61□□□□□ -0.55
Scrt1Q99M85 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Snora73a-201ENSMUST00000082453 205 ntBASIC11.61□□□□□ -0.55
Scrt1Q99M85 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scrt1Q99M85 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.6□□□□□ -0.55
Scrt1Q99M85 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.6□□□□□ -0.55
Scrt1Q99M85 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.6□□□□□ -0.55
Scrt1Q99M85 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.6□□□□□ -0.55
Scrt1Q99M85 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scrt1Q99M85 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm12241-201ENSMUST00000118330 726 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms