Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Gm14277-201ENSMUST00000121195 360 ntBASIC13.89□□□□□ -0.19
Clp1Q99LI9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.89□□□□□ -0.19
Clp1Q99LI9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.89□□□□□ -0.19
Clp1Q99LI9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm12217-201ENSMUST00000118858 696 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm12566-201ENSMUST00000121479 359 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm15547-201ENSMUST00000122152 333 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm8099-201ENSMUST00000200510 742 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm5904-201ENSMUST00000210286 865 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.88□□□□□ -0.19
Clp1Q99LI9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clp1Q99LI9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clp1Q99LI9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clp1Q99LI9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.87□□□□□ -0.19
Clp1Q99LI9 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.87□□□□□ -0.19
Clp1Q99LI9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.87□□□□□ -0.19
Clp1Q99LI9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Clp1Q99LI9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.87□□□□□ -0.19
Clp1Q99LI9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.87□□□□□ -0.19
Clp1Q99LI9 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms