Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Snora78-201ENSMUST00000158630 128 ntBASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd3Q99LE3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd3Q99LE3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd3Q99LE3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd3Q99LE3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.71□□□□□ -0.22
Lysmd3Q99LE3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lysmd3Q99LE3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd3Q99LE3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd3Q99LE3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms