Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gm15240-201ENSMUST00000118156 720 ntBASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm8410-201ENSMUST00000117225 605 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm25144-201ENSMUST00000179561 110 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm25352-201ENSMUST00000179815 110 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm43474-201ENSMUST00000196415 774 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.78□□□□□ -0.52
Thumpd1Q99J36 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.77□□□□□ -0.52
Thumpd1Q99J36 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thumpd1Q99J36 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm15693-201ENSMUST00000120470 637 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm3436-201ENSMUST00000179930 840 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm27622-201ENSMUST00000183779 60 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm27533-201ENSMUST00000183800 152 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms