Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc1bQ920F6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.27■□□□□ 0.04
Smc1bQ920F6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.27■□□□□ 0.04
Smc1bQ920F6 Gm38341-201ENSMUST00000195357 515 ntBASIC15.27■□□□□ 0.04
Smc1bQ920F6 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.27■□□□□ 0.04
Smc1bQ920F6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smc1bQ920F6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.27■□□□□ 0.03
Smc1bQ920F6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smc1bQ920F6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm8584-201ENSMUST00000171982 758 ntBASIC15.26■□□□□ 0.03
Smc1bQ920F6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm18935-201ENSMUST00000212692 664 ntBASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.26■□□□□ 0.03
Smc1bQ920F6 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.26■□□□□ 0.03
Smc1bQ920F6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.26■□□□□ 0.03
Smc1bQ920F6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smc1bQ920F6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm4271-201ENSMUST00000174444 973 ntBASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm42550-201ENSMUST00000201553 960 ntBASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gm9368-201ENSMUST00000219348 831 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms