Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Gm27892-201ENSMUST00000185017 106 ntBASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Gm8463-201ENSMUST00000208573 613 ntBASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha3Q91Y16 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha3Q91Y16 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm45841-201ENSMUST00000207700 164 ntBASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gm18473-201ENSMUST00000220543 868 ntBASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha3Q91Y16 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha3Q91Y16 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms