Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.33□□□□□ -0.27
Pcdhb3Q91XZ7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdhb3Q91XZ7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb3Q91XZ7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb3Q91XZ7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb3Q91XZ7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 AC165260.5-201ENSMUST00000224640 1247 ntBASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb3Q91XZ7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm8410-201ENSMUST00000117225 605 ntBASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm15171-201ENSMUST00000122191 334 ntBASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms