Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trex1Q91XB0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trex1Q91XB0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.08■□□□□ 0.01
Trex1Q91XB0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.08■□□□□ 0.01
Trex1Q91XB0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trex1Q91XB0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trex1Q91XB0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm20482-202ENSMUST00000174729 825 ntBASIC15.08■□□□□ 0
Trex1Q91XB0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.08■□□□□ 0
Trex1Q91XB0 Gm6082-201ENSMUST00000215204 454 ntBASIC15.08■□□□□ 0
Trex1Q91XB0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.08■□□□□ 0
Trex1Q91XB0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trex1Q91XB0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trex1Q91XB0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trex1Q91XB0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.07■□□□□ 0
Trex1Q91XB0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.07■□□□□ 0
Trex1Q91XB0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trex1Q91XB0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.07■□□□□ 0
Trex1Q91XB0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 Gm14704-201ENSMUST00000120300 874 ntBASIC15.07■□□□□ 0
Trex1Q91XB0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trex1Q91XB0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.07■□□□□ 0
Trex1Q91XB0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.07■□□□□ 0
Trex1Q91XB0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.07■□□□□ 0
Trex1Q91XB0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trex1Q91XB0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.07■□□□□ 0
Trex1Q91XB0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trex1Q91XB0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trex1Q91XB0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.06■□□□□ 0
Trex1Q91XB0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trex1Q91XB0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Gm10434-201ENSMUST00000101158 471 ntBASIC15.06■□□□□ 0
Trex1Q91XB0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trex1Q91XB0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trex1Q91XB0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.06■□□□□ 0
Trex1Q91XB0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.06■□□□□ 0
Trex1Q91XB0 Gm29199-201ENSMUST00000187766 775 ntBASIC15.06■□□□□ 0
Trex1Q91XB0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.06■□□□□ 0
Trex1Q91XB0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.06■□□□□ 0
Trex1Q91XB0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.06■□□□□ 0
Trex1Q91XB0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.06■□□□□ 0
Trex1Q91XB0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.06■□□□□ 0
Trex1Q91XB0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.06■□□□□ 0
Trex1Q91XB0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trex1Q91XB0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms