Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Mir8102-201ENSMUST00000184148 139 ntBASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Lsm1Q8VC85 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Gm15321-201ENSMUST00000121290 288 ntBASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Gm19931-201ENSMUST00000198920 368 ntBASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm1Q8VC85 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm22189-201ENSMUST00000103822 86 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm28760-201ENSMUST00000185995 736 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.68□□□□□ -0.38
Lsm1Q8VC85 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm1Q8VC85 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms