Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Syt7-204ENSMUST00000223586 1344 ntBASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Gm15321-201ENSMUST00000121290 288 ntBASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.25□□□□□ -0.29
Vps39Q8R5L3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps39Q8R5L3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms