Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd109Q8R422 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.57■□□□□ 0.56
Cd109Q8R422 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd109Q8R422 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC18.57■□□□□ 0.56
Cd109Q8R422 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cd109Q8R422 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd109Q8R422 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.57■□□□□ 0.56
Cd109Q8R422 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC18.57■□□□□ 0.56
Cd109Q8R422 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cd109Q8R422 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cd109Q8R422 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Cd109Q8R422 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.56■□□□□ 0.56
Cd109Q8R422 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cd109Q8R422 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 AC155637.1-201ENSMUST00000218560 636 ntBASIC18.56■□□□□ 0.56
Cd109Q8R422 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd109Q8R422 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm15459-201ENSMUST00000117405 1941 ntBASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm8355-201ENSMUST00000177767 1941 ntBASIC18.55■□□□□ 0.56
Cd109Q8R422 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm15276-201ENSMUST00000145953 498 ntBASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm16296-201ENSMUST00000159905 325 ntBASIC18.55■□□□□ 0.56
Cd109Q8R422 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm44967-201ENSMUST00000207047 631 ntBASIC18.55■□□□□ 0.56
Cd109Q8R422 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd109Q8R422 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.55■□□□□ 0.56
Cd109Q8R422 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.54■□□□□ 0.56
Cd109Q8R422 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 AC123857.2-201ENSMUST00000225756 1582 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Gm4760-201ENSMUST00000119663 1030 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 Gm13570-201ENSMUST00000140763 309 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC18.54■□□□□ 0.56
Cd109Q8R422 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC18.54■□□□□ 0.56
Cd109Q8R422 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 AC167013.1-201ENSMUST00000228592 202 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Mir339-201ENSMUST00000083659 96 ntBASIC18.54■□□□□ 0.56
Cd109Q8R422 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd109Q8R422 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd109Q8R422 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd109Q8R422 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd109Q8R422 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd109Q8R422 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Cd109Q8R422 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd109Q8R422 Gm13665-201ENSMUST00000120830 528 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms