Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm15198-201ENSMUST00000117283 177 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm11814-201ENSMUST00000119515 929 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm27847-201ENSMUST00000183711 107 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm27375-201ENSMUST00000183799 107 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Mir7221-201ENSMUST00000184009 72 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm7561-201ENSMUST00000211203 886 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gm6091-201ENSMUST00000098307 165 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ushbp1Q8R370 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ushbp1Q8R370 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ushbp1Q8R370 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ushbp1Q8R370 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ushbp1Q8R370 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.83□□□□□ -0.03
Ushbp1Q8R370 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ushbp1Q8R370 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm7287-201ENSMUST00000205267 602 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ushbp1Q8R370 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms