Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Mir3102-201ENSMUST00000175555 104 ntBASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp7Q8R1T1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp7Q8R1T1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Gm22121-201ENSMUST00000175148 54 ntBASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp7Q8R1T1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp7Q8R1T1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms