Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gm12928-201ENSMUST00000117115 573 ntBASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gm6152-201ENSMUST00000151704 340 ntBASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.6■□□□□ 0.09
Atf7Q8R0S1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Atf7Q8R0S1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Gm28911-201ENSMUST00000188837 117 ntBASIC15.59■□□□□ 0.09
Atf7Q8R0S1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Gm6180-201ENSMUST00000065243 498 ntBASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atf7Q8R0S1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Atf7Q8R0S1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Atf7Q8R0S1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Atf7Q8R0S1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Atf7Q8R0S1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm14928-201ENSMUST00000120198 477 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm11978-201ENSMUST00000122315 466 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm12091-201ENSMUST00000146791 830 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm8515-201ENSMUST00000194852 576 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms