Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.03□□□□□ -0.32
Treml1Q8K558 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Gm13612-201ENSMUST00000119276 390 ntBASIC13.03□□□□□ -0.32
Treml1Q8K558 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.03□□□□□ -0.32
Treml1Q8K558 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Gm9002-201ENSMUST00000178437 499 ntBASIC13.03□□□□□ -0.32
Treml1Q8K558 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.03□□□□□ -0.32
Treml1Q8K558 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Treml1Q8K558 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Treml1Q8K558 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Treml1Q8K558 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Treml1Q8K558 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Treml1Q8K558 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Treml1Q8K558 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Gm5687-201ENSMUST00000118252 640 ntBASIC13.02□□□□□ -0.33
Treml1Q8K558 Gm11803-201ENSMUST00000119966 444 ntBASIC13.02□□□□□ -0.33
Treml1Q8K558 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Proscos-202ENSMUST00000178990 666 ntBASIC13.02□□□□□ -0.33
Treml1Q8K558 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Treml1Q8K558 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.02□□□□□ -0.33
Treml1Q8K558 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Treml1Q8K558 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.01□□□□□ -0.33
Treml1Q8K558 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm8810-201ENSMUST00000172895 754 ntBASIC13.01□□□□□ -0.33
Treml1Q8K558 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm18473-201ENSMUST00000220543 868 ntBASIC13.01□□□□□ -0.33
Treml1Q8K558 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.01□□□□□ -0.33
Treml1Q8K558 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Treml1Q8K558 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms