Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.89□□□□□ -0.03
Syne4Q8CII8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.89□□□□□ -0.03
Syne4Q8CII8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.88□□□□□ -0.03
Syne4Q8CII8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Syne4Q8CII8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm14704-201ENSMUST00000120300 874 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm13461-201ENSMUST00000120980 662 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm27023-201ENSMUST00000182372 285 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm28450-201ENSMUST00000187349 638 ntBASIC14.87□□□□□ -0.03
Syne4Q8CII8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne4Q8CII8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm8885-201ENSMUST00000189382 598 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm8959-201ENSMUST00000213150 571 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms