Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps50Q8CI71 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps50Q8CI71 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps50Q8CI71 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vps50Q8CI71 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm11478-201ENSMUST00000117851 599 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm5354-201ENSMUST00000182417 973 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm2445-201ENSMUST00000182798 989 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gm18027-201ENSMUST00000218947 619 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.05□□□□□ -0.32
Vps50Q8CI71 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps50Q8CI71 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.04□□□□□ -0.32
Vps50Q8CI71 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.04□□□□□ -0.32
Vps50Q8CI71 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Gm12091-201ENSMUST00000146791 830 ntBASIC13.04□□□□□ -0.32
Vps50Q8CI71 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.04□□□□□ -0.32
Vps50Q8CI71 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps50Q8CI71 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Gm12490-201ENSMUST00000120255 560 ntBASIC13.03□□□□□ -0.32
Vps50Q8CI71 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps50Q8CI71 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms