Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm14928-201ENSMUST00000120198 477 ntBASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gm9797-201ENSMUST00000052902 613 ntBASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcpip1Q8CDG3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.21□□□□□ -0.13
Vcpip1Q8CDG3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms