Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gm27772-201ENSMUST00000184900 187 ntBASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lysmd4Q8CC84 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm6415-201ENSMUST00000118488 348 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms