Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim9Q8C7M3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim9Q8C7M3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim9Q8C7M3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim9Q8C7M3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.58□□□□□ -0.07
Trim9Q8C7M3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.58□□□□□ -0.08
Trim9Q8C7M3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim9Q8C7M3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gm44069-201ENSMUST00000204898 506 ntBASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.57□□□□□ -0.08
Trim9Q8C7M3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim9Q8C7M3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms