Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm7857-201ENSMUST00000117957 358 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm6447-201ENSMUST00000118905 835 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm13461-201ENSMUST00000120980 662 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a6Q8C6K9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm37835-201ENSMUST00000193305 361 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm18584-201ENSMUST00000203098 964 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm23270-201ENSMUST00000104055 131 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm31256-201ENSMUST00000194705 506 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm13097-201ENSMUST00000210722 397 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a6Q8C6K9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms