Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sh3rf2Q8BZT2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gm14723-201ENSMUST00000118686 215 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gm11793-201ENSMUST00000120433 981 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf2Q8BZT2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm11591-201ENSMUST00000120063 702 ntBASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm12363-201ENSMUST00000122250 668 ntBASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf2Q8BZT2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms